CLUSTAL 2.1 multiple sequence alignment


NCBI_gi_157310886_270_p1      TCTATACAAGTGTGGGTTTTAAAACCAACAATTAATAGAGTTCTGTGTCT 50
SSR_11_CONTIG_265_p1          TCTATACAAGTGTGGGTTTTAAAACCAACAATTAATAGAGTTCTGTGTCT 50
SSR_11_CONTIG_227_p2          TCTATACAAGTGTGGGTTTTAAAACCAACAATTAATAGAGTTCTGTGTCT 50
SSR_11_CONTIG_220_p3          TCTATACAAGTGTGGGTTTTAAAACCAACAATTAATAGAGTTCTGTGTCT 50
                              **************************************************

NCBI_gi_157310886_270_p1      TCTGCTTGTAGGTAATGTGGTGGACATTTACCAGCGTGAGTTTCTGGCCC 100
SSR_11_CONTIG_265_p1          TCTGCTTGTAGGTAATGTGGTGGACATTTACCAGCGTGAGTTTCTGGCCC 100
SSR_11_CONTIG_227_p2          TCTGCTTGTAGGTAATGTGGTGGACATTTACCAGCGTGAGTTTCTGGCCC 100
SSR_11_CONTIG_220_p3          TCTGCTTGTAGGTAATGTGGTGGACATTTACCAGCGTGAGTTTCTGGCCC 100
                              **************************************************

NCBI_gi_157310886_270_p1      TGAGAGACCGTCTGCACTCCGCTGAGCAAGAGAACCTCAAACGCTCCAAA 150
SSR_11_CONTIG_265_p1          TGAGAGACCGTCTGCACTCCGCTGAGCAAG-----NNNNNACGCTCCAAA 145
SSR_11_CONTIG_227_p2          TGAG------------------------------TTTC------------ 108
SSR_11_CONTIG_220_p3          TGA----------------------------------C------------ 104
                              ***                                               

NCBI_gi_157310886_270_p1      GAGCTCAACCTGGTGCTGGACGAAATCAAGAGAGCCATCGCTGAGAAACA 200
SSR_11_CONTIG_265_p1          GAGCTCAACCTGGTGCTGGACGAAATCAAGAGAGCCATCGCTGAGAAACA 195
SSR_11_CONTIG_227_p2          -AGCTCAACCTGGTGCTGGACGAAATCAAGAGAGCCATCGCTGAGAAACA 157
SSR_11_CONTIG_220_p3          ----TCAACCTGGTGCTGGACGAAATCAAGAGAGCCATCGCTGAGAAACA 150
                                  **********************************************

NCBI_gi_157310886_270_p1      AGCACTGCGGGACATCAACCGTACCTGGAGCAGCCTGTCAGGTGAGAGAA 250
SSR_11_CONTIG_265_p1          AGCACTGCGGGACACCAACCGTACCTGGAGCAGCCTGTCAGGTGAGAGAA 245
SSR_11_CONTIG_227_p2          AGCACTGCGGGACATCAACCGTACCTGGAGCAGCCTGTCAGGTGAGAGAA 207
SSR_11_CONTIG_220_p3          AGCACTGCGGGACATCAACCGTACCTGGAGCAGCCTGTCAGGTGAGAGAA 200
                              ************** ***********************************

NCBI_gi_157310886_270_p1      TAGCCTGAATGCAAGACCCA 270
SSR_11_CONTIG_265_p1          TAGCCTGAATGCAAGACCCA 265
SSR_11_CONTIG_227_p2          TAGCCTGAATGCAAGACCCA 227
SSR_11_CONTIG_220_p3          TAGCCTGAATGCAAGACCCA 220
                              ********************